When at first you don’t succeed…

One of the most frustrating things about science is that you spend a lot of time wondering if you’re headed down the right path. Although having multiple ways of doing things can be a benefit, it can also lead to second-guessing. I have spent more time than I care to admit thinking about whether the method I’m currently using is the best way to achieve results. Unfortunately, the past few weeks have been a lot of trial and error. I spent a week trying to get my data in the correct format in order to use a package on it (PAML; Phylogenetic Analysis by Maximum Likelihood) only to realize that the package wasn’t ideal for the low read coverage data I’m working with. This meant I was forced to jump ship and start trying to figure out a completely new way of doing things.

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